PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA4899
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family Dof
Protein Properties Length: 159aa    MW: 17468.8 Da    PI: 8.3205
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA4899genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof40.84.6e-1335712560
                    zf-Dof 25 slsqPryfCkaCrryWtkGGalrnvPvGggr.rknkk 60
                              s +q  y+Ck+  ryWt+GG++rn+P+ gg  rknkk
  Tp57577_TGAC_v2_mRNA4899 35 SHNQDIYLCKTSIRYWTQGGSFRNIPLEGGHpRKNKK 71
                              568999********************96664388887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027016.4E-93471IPR003851Zinc finger, Dof-type
ProDomPD0074787.0E-63871IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MEGITPISCT RAAIELSNLQ TKQHLVLLLQ QTTDSHNQDI YLCKTSIRYW TQGGSFRNIP  60
LEGGHPRKNK KIITSSSPSL SSSISSHNMI KGNDLSLAIP AMDKYHVAGM LCSSPYVEIS  120
DNNTCSNGLI NSANNYAPNS LMMMSSSNAQ YYQSWFIM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004494837.16e-24PREDICTED: dof zinc finger protein DOF4.1-like
TrEMBLA0A0B2Q2V59e-22A0A0B2Q2V5_GLYSO; Dof zinc finger protein DOF3.7
TrEMBLK7MET19e-22K7MET1_SOYBN; Uncharacterized protein
STRINGGLYMA16G02550.23e-21(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00940.11e-08Dof family protein